peptide-identification topic
List
peptide-identification repositories
DeepNovo
91
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39
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Protein Identification with Deep Learning
peptide-prediction-list
42
Stars
8
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Collects software dedicated to predicting specific properties of peptides
psm_utils
20
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6
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Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python
denovopipeline
25
Stars
8
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Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.
ursgal
42
Stars
32
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Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis
pFind3
23
Stars
7
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ms2rescore
38
Stars
15
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Modular and user-friendly platform for AI-assisted rescoring of peptide identifications