pathway topic
pathfindR
pathfindR: Enrichment Analysis Utilizing Active Subnetworks
pypath
Python module for prior knowledge integration. Builds databases of signaling pathways, enzyme-substrate interactions, complexes, annotations and intercellular communication roles.
KEGG-Crawler
A parallel API crawler for the retrieval of Kyoto Encyclopedia of Genes and Genomes metabolic and genomics data.
pathway-benchmarks
Benchmarks for data processing systems: Pathway, Spark, Flink, Kafka Streams
llm-app
LLM App templates for RAG, knowledge mining, and stream analytics. Ready to run with Docker,⚡in sync with your data sources.
ggkegg
Analyzing and visualizing KEGG information using the grammar of graphics
pathway-examples
Code examples for the Pathway programming framework
pathway
Python ETL framework for stream processing, real-time analytics, LLM pipelines, and RAG.
aPEAR
Enrichment Networks for Pathway Enrichment Analysis