nextflow topic
patterns
A curated collection of Nextflow implementation patterns
flowcraft
FlowCraft: a component-based pipeline composer for omics analysis using Nextflow. :whale::package:
scrnaseq
A single-cell RNAseq pipeline for 10X genomics data
fetchngs
Pipeline to fetch metadata and raw FastQ files from public databases
test-datasets
Test data to be used for automated testing with the nf-core pipelines
nextflow-example
A simple DSL2 workflow: tutorial
mag
Assembly and binning of metagenomes
dockstore
Our VM/Docker sharing infrastructure and management component
ampliseq
Amplicon sequencing analysis workflow using DADA2 and QIIME2