nextflow topic
List
nextflow repositories
patterns
317
Stars
71
Forks
Watchers
A curated collection of Nextflow implementation patterns
flowcraft
238
Stars
44
Forks
Watchers
FlowCraft: a component-based pipeline composer for omics analysis using Nextflow. :whale::package:
scrnaseq
172
Stars
148
Forks
Watchers
A single-cell RNAseq pipeline for 10X genomics data
fetchngs
126
Stars
67
Forks
Watchers
Pipeline to fetch metadata and raw FastQ files from public databases
test-datasets
88
Stars
322
Forks
Watchers
Test data to be used for automated testing with the nf-core pipelines
nextflow-example
23
Stars
7
Forks
Watchers
A simple DSL2 workflow: tutorial
mag
183
Stars
98
Forks
Watchers
Assembly and binning of metagenomes
dockstore
115
Stars
28
Forks
Watchers
Our VM/Docker sharing infrastructure and management component
ampliseq
157
Stars
105
Forks
Watchers
Amplicon sequencing analysis workflow using DADA2 and QIIME2