ncbi-sra topic
List
ncbi-sra repositories
pysradb
297
Stars
49
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Package for fetching metadata and downloading data from SRA/ENA/GEO
grabseqs
104
Stars
16
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A utility for easy downloading of reads from next-gen sequencing repositories like NCBI SRA
pyrpipe
78
Stars
27
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Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.
r2g
48
Stars
2
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A homology-based, computationally lightweight pipeline for discovering genes in the absence of an assembly
modulome-workflow
15
Stars
18
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Workflow to download, process, and explore microbial RNA-seq data from NCBI SRA
seqsender
32
Stars
10
Forks
Watchers
Automated Pipeline to Generate FTP Files and Manage Submission of Sequence Data to Public Repositories