homology topic

List homology repositories

scikit-tda

497
Stars
53
Forks
Watchers

Topological Data Analysis for Python🐍

ripser.py

260
Stars
60
Forks
Watchers

A Lean Persistent Homology Library for Python

MoguTDA

112
Stars
26
Forks
Watchers

Topological Data Analysis in Python: Simplicial Complex

persim

120
Stars
51
Forks
Watchers

Distances and representations of persistence diagrams

Ripserer.jl

63
Stars
7
Forks
Watchers

Flexible and efficient persistent homology computation.

kenzo

50
Stars
8
Forks
Watchers

A repackaged version of the Kenzo program by Francis Sergeraert and collaborators.

TDAstats

37
Stars
9
Forks
Watchers

R pipeline for computing persistent homology in topological data analysis. See https://doi.org/10.21105/joss.00860 for more details.

r2g

48
Stars
2
Forks
Watchers

A homology-based, computationally lightweight pipeline for discovering genes in the absence of an assembly

amoebae

20
Stars
2
Forks
Watchers

Workflow for identifying and classifying homologous gene/protein sequences