homology topic
scikit-tda
Topological Data Analysis for Python🐍
ripser.py
A Lean Persistent Homology Library for Python
MoguTDA
Topological Data Analysis in Python: Simplicial Complex
persim
Distances and representations of persistence diagrams
Ripserer.jl
Flexible and efficient persistent homology computation.
kenzo
A repackaged version of the Kenzo program by Francis Sergeraert and collaborators.
TDAstats
R pipeline for computing persistent homology in topological data analysis. See https://doi.org/10.21105/joss.00860 for more details.
r2g
A homology-based, computationally lightweight pipeline for discovering genes in the absence of an assembly
amoebae
Workflow for identifying and classifying homologous gene/protein sequences