mirna topic

List mirna repositories

mirdeep2

130
Stars
50
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Discovering known and novel miRNAs from small RNA sequencing data

seqcluster

36
Stars
17
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small RNA analysis from NGS data

Perl-for-Bioinformatics

33
Stars
31
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An attempt to help anyone interested in using Perl for Bioinformatics

smallrnaseq

29
Stars
19
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small rna-seq analysis package

circrna

43
Stars
21
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circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data

OmicSelector

31
Stars
3
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OmicSelector - Environment, docker-based application and R package for biomarker signiture selection (feature selection) & deep learning diagnostic tool development from high-throughput high-throughpu...

mirtop

18
Stars
21
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command lines tool to annotate miRNAs with a standard mirna/isomir naming

sports1.1

45
Stars
16
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Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs

TransfoRNA

21
Stars
2
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TransfoRNA: Navigating the Uncertainties of Small RNA Annotation with an Adaptive Machine Learning Strategy