mirna topic
mirdeep2
Discovering known and novel miRNAs from small RNA sequencing data
seqcluster
small RNA analysis from NGS data
Perl-for-Bioinformatics
An attempt to help anyone interested in using Perl for Bioinformatics
smallrnaseq
small rna-seq analysis package
circrna
circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data
OmicSelector
OmicSelector - Environment, docker-based application and R package for biomarker signiture selection (feature selection) & deep learning diagnostic tool development from high-throughput high-throughpu...
mirtop
command lines tool to annotate miRNAs with a standard mirna/isomir naming
sports1.1
Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs
TransfoRNA
TransfoRNA: Navigating the Uncertainties of Small RNA Annotation with an Adaptive Machine Learning Strategy