metabolism topic
cobrapy
COBRApy is a package for constraint-based modeling of metabolic networks.
metaGEM
:gem: An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from metagenomic data
carveme
CarveMe: genome-scale metabolic model reconstruction
cobrame
A COBRApy extension for genome-scale models of metabolism and expression (ME-models)
scFEA
single cell Flux Estimation Analysis (scFEA) Try the below web server!
embl_gems
EMBL GEMs: A collection of GEnome-scale Models for bacterial species
framed
framed: a metabolic modeling package for python
reframed
ReFramed: metabolic modeling package
MetQy
Repository for R package MetQy (read related publication here: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6247936/)
metabolismobasal
Simple metabolic calculator to weight loss