biochemistry topic

Toolbox for molecular animations in Blender, powered by Geometry Nodes.

BradyAJohnston

COBRApy is a package for constraint-based modeling of metabolic networks.

opencobra

Ribbon diagrams of proteins in #golang.

fogleman

Scientific Computing for Chemists with Python is a free book for teaching basic coding skills to chemists using Python, Jupyter notebooks, and the other Python software. This textbook teaches a variet...

weisscharlesj

Computational synthetic biology: Predicting DNA edits for bioengineering

20n

COPASI is a software application for simulation and analysis of biochemical networks and their dynamics.

copasi

Python package to study microbial communities using metabolic modeling.

micom-dev

Analysis of non-covalent interactions in MD trajectories

maxscheurer

Contact map analysis for biomolecules; based on MDTraj

dwhswenson

Experimental tech-demo for PhD thesis in Scientific Markdown; official:

katrinleinweber