metabarcoding topic

Versatile open-source tool for microbiome analysis

torognes

Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data

grunwaldlab

Accurate sample inference from amplicon data with single nucleotide resolution

benjjneb

A robust and fast clustering method for amplicon-based studies

torognes

Simple statistical identification and removal of contaminants in marker-gene and metagenomics sequencing data

benjjneb

Amplicon sequencing analysis workflow using DADA2 and QIIME2

nf-core

Protist Ribosomal Reference database (PR2) - SSU rRNA gene database

pr2database

A python package to query different databases of boldsystems.org

DominikBuchner

Environmental DNA metabarcoding taxonomic identification

enormandeau

This repository contains CO1 reference sets that can be used with the RDP Classifier, BLAST, or SINTAX to classify COI metabarcode sequences.

terrimporter