hla-sequence topic

List hla-sequence repositories

HLAminer

50
Stars
15
Forks
Watchers

⛏ HLA predictions from NGS shotgun data

SpecHLA

24
Stars
9
Forks
Watchers

SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, and -DRB1 genes. Also, it supports both short- and long-read da...