genome topic
cellular-automaton
🧫 A complex cellular automaton which simulates an entire ecosystem : universe, flora and fauna.
context
Raw dump of Kenneth Reitz's DNA Sequence, Ancestry, Genealogy, &c.
AI-Programmer
Using artificial intelligence and genetic algorithms to automatically write programs. Tutorial: http://www.primaryobjects.com/cms/article149
VariantSpark
machine learning for genomic variants
mosdepth
fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing
abyss
:microscope: Assemble large genomes using short reads
deepvariant
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
gatk
Official code repository for GATK versions 4 and up
IAMDinosaur
🦄 An Artificial Inteligence to teach Google's Dinosaur to jump cactus
pyGeno
Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs