fastq-files topic

Easier download/extract of FASTA/Q read data and metadata from the ENA, NCBI, AWS or GCP.

wwood

An efficient FASTQ manipulation suite

alastair-droop

FASTQ compression

shubhamchandak94

Fast FASTA/Q parser and writer (C++ re-implementation of kseq library)

cartoonist

A versatile compressor of third generation sequencing reads.

refresh-bio

Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.

nunofonseca

A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust

angelovangel

:construction_worker: Fasten toolkit, for streaming operations on fastq files

lskatz

Parse and process FASTA and FASTQ formatted files of biological sequences.

BioJulia

less like viewer for fastq files

openpaul