evolution topic
manuscript
This repository implements an automated system to write our collaborative manuscript, while tracking changes and contributions.
Cellsim-2
Simulating complete lives of different cellular animals and plants. Evolution, inheritance, predation and more.
HGTector
HGTector2: Genome-wide prediction of horizontal gene transfer based on distribution of sequence homology patterns.
ClipKIT
a multiple sequence alignment-trimming algorithm for accurate phylogenomic inference
protozoa
A simulation of protozoan behavior and evolution
pdbcolor
Python code to color a PDB structure based on parameters from a multiple sequence alignment
BetaScan
Genome-wide scan for balancing selection using beta statistic
orthofisher
a broadly applicable tool for automated gene identification and retrieval
coala
A Framework for Coalescent Simulation in R