evolution topic

Hardware and software for accessible, extensible, and scalable bioreactors. Built on Raspberry Pi.

Pioreactor

🧬 Agent-based artificial life evolution simulator.

yuuretsu

Algorithm For Gene Order Reconstruction in Ancestors

DyogenIBENS

a UNIX shell toolkit for processing and analyzing multiple sequence alignments and phylogenies

JLSteenwyk

zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)

Kalan-Lab

A public python implementation of the DeepHyperNEAT system for evolving neural networks. Developed by Felix Sosa and Kenneth Stanley. See paper here: https://eplex.cs.ucf.edu/papers/sosa_ugrad_report1...

flxsosa

A Python API for estimating statistical high-order epistasis in genotype-phenotype maps.

harmslab

EXONA: The Evolutionary eXploration of Neural Networks Framework -- EXACT, EXALT and EXAMM

travisdesell

Repository of the R-packageGen3sis

project-gen3sis

A tool for plotting CAFE5 gene family expansion/contraction result

moshi4