Jacob L. Steenwyk

icon indicating a website link jlsteenwyk.com icon indicating an email [email protected]

icon company University of California, Berkeley icon location Berkeley, CA icon location Omics & Software Eng 🧬👨🏽‍💻 | HHMI Awardee of the LSRF & Berkeley Science Fellow at UC-Berkeley 🐻👨🏽‍🔬 | Previous HHMI Gilliam Fellow at Vanderbilt🧬🎓

Results 6 repositories owned by Jacob L. Steenwyk

ggpubfigs

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colorblind friendly color palettes and ggplot2 graphic system extensions for publication-quality scientific figures

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PhyKIT

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a UNIX shell toolkit for processing and analyzing multiple sequence alignments and phylogenies

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ClipKIT

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a multiple sequence alignment-trimming algorithm for accurate phylogenomic inference

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orthofisher

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a broadly applicable tool for automated gene identification and retrieval

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BioKIT

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a versatile toolkit for processing and analyzing diverse types of sequence data

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orthosnap

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a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees

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