evolutionary-biology topic
rcourse
Reproducible Quantitative Methods for EEB
PhyKIT
a UNIX shell toolkit for processing and analyzing multiple sequence alignments and phylogenies
orthogene
🧬 o r t h o g e n e 🧬✨✨✨✨✨✨✨ Interspecies gene mapping✨✨✨✨✨ 🦠 🔁 🌱 🔁 🌳 🔁 🍎 🔁 🍊 🔁 🪱 🔁 🪰 🔁 🐟 🔁 🦎 🔁 🐓 🔁 🦇 🔁 🐄 🔁 🐖 🔁 🐐 🔁 🐎 🔁 🐈 🔁 🐕 🔁 🐁 🔁 🐒 🔁 🦧 🔁 🦍...
pypop
PyPop: Python for Population Genomics
ClipKIT
a multiple sequence alignment-trimming algorithm for accurate phylogenomic inference
orthofisher
a broadly applicable tool for automated gene identification and retrieval
BioKIT
a versatile toolkit for processing and analyzing diverse types of sequence data
EvolutionSimulation01
Evolutionary simulation where agents age, reproduce, and eat each other
orthosnap
a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees
TreeTools
Create, modify and analyse phylogenetic trees in R