cell-cell-communication topic

SoptSC for single cell data analysis: unsupervised inference of clustering, cell lineage, pseudotime and cell-cell communication network from scRNA-seq data.

WangShuxiong

MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell transcriptomics data

saeyslab

Code used to create the core and extended GBmap, including downstream analyses (cell-cell interactions, spatial transcriptomics deconvolution) and how to produce the figures.

ccruizm

Collection of computational tools for cell-cell communication inference for single-cell and spatially resolved omics

multitalk

Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks

SunXQlab

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics

jinworks

Spatial direct messaging detected by bivariate Moran

StatBiomed

HoloNet. Reveal the holograph of functional communication events in spatial transcriptomics. Help understand how microenvironments shaping cellular phenotypes

lhc17