core-package topic
List
core-package repositories
BiocParallel
63
Stars
29
Forks
Watchers
Bioconductor facilities for parallel evaluation
Biostrings
47
Stars
16
Forks
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Efficient manipulation of biological strings
GenomicRanges
41
Stars
17
Forks
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Representation and manipulation of genomic intervals
GenomeInfoDb
26
Stars
14
Forks
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Utilities for manipulating chromosome names, including modifying them to follow a particular naming style
Rsamtools
25
Stars
25
Forks
Watchers
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import
SummarizedExperiment
24
Stars
8
Forks
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SummarizedExperiment container
GenomicFeatures
24
Stars
12
Forks
Watchers
Conveniently import and query gene models
VariantAnnotation
22
Stars
20
Forks
Watchers
Annotation of Genetic Variants
DelayedArray
20
Stars
9
Forks
Watchers
A unified framework for working transparently with on-disk and in-memory array-like datasets
IRanges
18
Stars
9
Forks
Watchers
Foundation of integer range manipulation in Bioconductor