krust

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implement map reduce

1

I was looking for a fast kmer counter and came across this as well as your package: https://pirl.unc.edu/blog/shaking-the-rust-off-python-redox I guess there's also `needletail` which is older, on crates.io and hence...

mjbroerman

suchapalaver

https://rustwasm.github.io/docs/book/reference/add-wasm-support-to-crate.html#adding-support-for-webassembly

suchapalaver

writing a line per kmer is too inefficient and rarely needed. Much better to just return a vector of kmer hashmaps. Alternatively, make a hashmap containing n -> m pairs,...

suchapalaver

suchapalaver

could be a great functionality to add to your tool in time, maybe make one that is loadable into whatever handles hash tables in Rust

suchapalaver