Shaun Jackman
Shaun Jackman
@david942j Can you recommend a document that I ought to read to get up to speed on ELF file layout? In which section and segment is the `RPATH` stored? ```...
Hackseq 2017 was most successful! Here's an example of our ChromeQC report: https://hackseq.github.io/2017_project_6/report/ and our MultiQC report: https://hackseq.github.io/2017_project_6/multiqc/
The ChromeQC web site has moved to https://bcgsc.github.io/chromeqc/ and the GitHub repo has moved here: https://github.com/bcgsc/chromeqc
Fixed. Thanks for the bug report, Amali! I've fixed the issue in commit dd87e0cdcafb34f718a29cfd6453d5d460c32b3c. Run `make data/4M-with-alts-february-2016.txt` to download https://raw.githubusercontent.com/10XGenomics/supernova/master/tenkit/lib/python/tenkit/barcodes/4M-with-alts-february-2016.txt
`clang-tidy` should ignore the file`Tests/Unit/catch.hpp` because it's vendored. You could move it to a subdirectory of `vendor/`.
This PR must pass CI before merging. One way to do that is to make the necessary fixes to silence the `clang-tidy` errors. Another option is to ignore the failure...
Is this PR the next to be merged?
That sounds good.
Use ntCard to count the number of distinct 32-mers in the data set. With that value in hand, we can predict the memory usage of ABySS. https://github.com/bcgsc/ntCard
The easiest way to install ABySS with a different value of `maxk` is to use Linuxbrew. Install Linuxbrew https://linuxbrew.sh ``` brew tap brewsci/bio brew edit abyss # Change --enable-maxk=128 to...