Wei Shen

Results 24 repositories owned by Wei Shen

taxonkit

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A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV

kmcp

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Accurate metagenomic profiling && Fast large-scale sequence/genome searching

BlackheartedHospital

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网传附莆田系医院名单,欢迎更新

bwt

19
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Burrows-Wheeler Transform and FM-index in golang

cnote

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A platform independent command line note app

go4bio

30
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Golang for Bioinformatics

gtaxon

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gTaxon - a fast cross-platform NCBI taxonomy data querying (gi2taxid, taxid2taxon, name2taxid, LCA) tool, with cmd client and REST API server for both local and remote server.

gtdb-taxdump

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GTDB taxonomy taxdump files with trackable TaxIds

taxid-changelog

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NCBI taxonomic identifier (taxid) changelog, including taxids deletion, new adding, merge, reuse, and rank/name changes.

unikmer

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a versatile toolkit for k-mers with taxonomic information