Ryan Ly

Do not allow write with a `DynamicTableRegion` index that is out of bounds

4

Do not allow writing of a file with a `DynamicTableRegion` index that is out of bounds. The file is unreadable. Attempting to read it results in a cryptic error message...

Draft PR to easily manage the Linux dev branch. See #670 and #865 for previous PRs.

Create default processing modules

2

## Motivation Fix #946. @bendichter let me know what you think. With this PR, a new `NWBFile` will contain empty `ProcessingModule` objects named "ecephys", "icephys", "ophys", and "behavior" on initialization....

### What would you like to see added to PyNWB? To better support changes in NWB Container constructor arguments (e.g., https://github.com/NeurodataWithoutBorders/pynwb/issues/954), we would like to start the process toward not...

Deprecate ImageMaskSeries

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## Motivation Corresponds to https://github.com/NeurodataWithoutBorders/nwb-schema/pull/583 - Waiting on test suite to pass - Waiting on schema changes to merge to dev ## How to test the behavior? ``` ImageMaskSeries() #...

Deprecate EventWaveform class

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## Motivation Corresponds to https://github.com/NeurodataWithoutBorders/nwb-schema/pull/584 - Waiting on test suite to pass - Waiting on schema changes to merge to dev ## How to test the behavior? ``` EventWaveform() #...

[Bug]: UserWarning: NWBFile not found within the configuration for core

1

### What happened? When linkml is installed, the test suite generates a few unexpected warnings. See https://github.com/NeurodataWithoutBorders/pynwb/actions/runs/10053028713/job/27828470283 I am not sure why they are being generated or if this might...

[Feature]: Chunk all TimeSeries data and timestamps by default

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### What would you like to see added to PyNWB? Chunking generally improves read/write performance and is more cloud-friendly (and LINDI-friendly). (Related to https://github.com/NeurodataWithoutBorders/lindi/pull/84.) I suggest that `TimeSeries.__init__` wraps data...

Improve docs around waveforms

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## Motivation It is confusing to write Units waveforms with different numbers of electrodes and units. This PR improves the API docs for `Units.add_unit`. ## How to test the behavior?...

### What would you like to see added to MatNWB? From @vijayiyer05 > MATLAB is live on DandiHub again, and we're looking forward to spread the word, potentially later this...