[Bug]: UserWarning: NWBFile not found within the configuration for core

[rly]

What happened?

When linkml is installed, the test suite generates a few unexpected warnings. See https://github.com/NeurodataWithoutBorders/pynwb/actions/runs/10053028713/job/27828470283

I am not sure why they are being generated or if this might appear for typical users.

Steps to Reproduce

Run test suite with linkml installed and no configuration file

Traceback

/home/runner/work/pynwb/pynwb/.tox/py311-optional/lib/python3.11/site-packages/hdmf/container.py:142: UserWarning: NWBFile not found within the configuration for core
  warn(msg)

Operating System

macOS

Python Executable

Conda

Python Version

3.11

Package Versions

No response

Code of Conduct

• [X] I agree to follow this project's Code of Conduct
• [X] Have you checked the Contributing document?
• [X] Have you ensured this bug was not already reported?

[mavaylon1]

Sure thing

[rly]

Fixed in #1302