Ryan Ly

[Proposal] Refactor behavioral neurodata types

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Documenting this topic briefly after @bendichter @oruebel and I discussed this today. We are not a fan of how `SpatialSeries` objects are labeled/tagged/identified as position data, direction data, eye tracking...

Address https://github.com/NeurodataWithoutBorders/pynwb/issues/1693 This issue tracks the revamp of https://github.com/NeurodataWithoutBorders/nwb-schema/pull/576 which was merged and then pulled (https://github.com/NeurodataWithoutBorders/nwb-schema/pull/595) after issues were raised when implementing this in pynwb. The NWB TAB discussed this...

Add DeviceModel neurodata type

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## Summary of changes Fix #607 ## Checklist For all schema changes: - [x] Add release notes for the PR to `docs/format/source/format_release_notes.rst`. - [x] Have you included the relevant issue...

Add `DeviceModel` neurodata type

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## Problem We discussed today at the NWB meeting the need in both https://github.com/catalystneuro/ndx-ophys-devices and https://github.com/catalystneuro/ndx-extracellular-channels for a neurodata type that represents the model of a device as opposed to...

PyPI release?

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**Is your feature request related to a problem? Please describe.** I am using oaklib in a project and `import oaklib` results in: ``` tests/unit/test_term_set.py:17: in import oaklib # noqa: F401...

Paste without formatting, without resetting text style

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### Have you read a contributing guide? - [x] I have read CONTRIBUTING.md - [x] I have searched the existing requests and didn't find any that were similar - [x]...

Support photometry data

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Berke Lab is generating NWB files with photometry data to be inserted into Spyglass. They are starting to think about how to use Spyglass to process and analyze these data....

### What happened? Follow-up to https://github.com/hdmf-dev/hdmf-zarr/issues/273 As @oruebel wrote: > While TimeSeries does not restrict the data type, it assume the use of a basic numeric data type (int, float)...

### What would you like to see added to HDMF? When printing some NWB files in a notebook, the HTML representation is ginormous, e.g., https://github.com/dandi-ai-notebooks/000673/blob/main/2025-04-16-gpt-4o-prompt-b-4/000673.ipynb ### What solution would you...

[Bug]: Accessing an indexed (ragged) column by attribute returns VectorData instead of VectorIndex

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### What happened? The attribute syntax `table.col_name` currently returns the `VectorData` instead of the `VectorIndex` for a ragged array. It should return the same `VectorIndex` as in `table[col_name]` and `table.get(col_name)`....