Ryan Ly

Results 304 issues of Ryan Ly

In support of #992 and #994, we should add documentation and examples for usage of `NWBFile.copy`.

category: enhancement
topic: docs
priority: low

## Feature Request It has often been requested that a table can be appended to, e.g. the units table, epochs table, invalid time intervals tables, etc. over the course of...

category: enhancement
priority: medium
topic: HDMF

### What would you like to see added to PyNWB? As mentioned in #1880, `get_data_in_units()` loads the entire dataset into memory. For large datasets, that is impractical and will silently...

category: proposal
priority: low

### What would you like to see added to PyNWB? From @dysprague: When looping through all files in [dandiset 000541](https://dandiarchive.org/dandiset/000541?search=000541&pos=1) and extracting the NeuroPAL images, it takes ~33 minutes. There...

category: enhancement
priority: low

This PR adds an alternate approach to specifying the `TemperatureDataset` defined in `tests/input/examples/schema_definition-native-array-1.yaml`. This approach uses classes that implement [`linkml:NDArray`](https://github.com/linkml/linkml-model/blob/main/linkml_model/model/schema/array.yaml) and have an attribute that implements `linkml:elements` as defined pre-1.7.0...

The Spyglass database and code are intricately linked. The tables defined in Python within Spyglass are intended to have a perfect correspondence with the tables in the MySQL database. If...

enhancement
common

Although uncommon, some NWB files have multiple ElectricalSeries or other objects under `/acquisition/raw`. However, spyglass is currently limited to importing the NWB file only if there is a single object...

enhancement
common

I followed the steps at the bottom of the README to install mesmerize and run the tests and got the following errors on my Mac M1. I suspect that these...

Now that we use hatch to build instead of setuptools, and hatch has its own way of specifying which files go into the sdist/wheel, `MANIFEST.in` is no longer used and...

## Motivation Fix #411, fix #865 Major change to allow setting attributes on Container objects to new values, including None. If the attributes were read from a file (i.e. `container_source...