Krona
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marbl
Interactively explore metagenomes and more from a web browser.
I recently updated my nr and krona tools databases and when I used ktClassifyBLAST to classify my blast results I got a warning that hundreds of accession numbers were not...
Hello, This is more of a request for advice rather than an issue with your code. For context, I am pretty new to this sort of data analysis When I...
Hi, I just started using Krona and I am very pleased with it. Thank you very much for your effort! To the problem With `ktImportText`, I get a great looking...
Hello, When running both ./updateTaxonomy.sh and ./updateAccessions.sh I encounter the following error: molbio@CLCServer:/MolbioDataDrive/Scripts/KronaTools-2.7.1$ ./updateTaxonomy.sh Fetching taxdump.tar.gz... Fetching checksum... Checksum for taxdump.tar.gz matches server. ./updateTaxonomy.sh: line 287: make: command not found...
Can anyone help me with this the data that I have was created by using a 2014 NCBI database so krona doesnt know some of the tax ids can anyone...
The [2011 Ondov et al. BMC Bioinformatics paper](http://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-12-385) says, _For categorical variables, users may define the color of every node in the XML_, but it's not clear how to express...
Hi, I used your tool and I got this comment from the Editor: If possible, please adjust the red/green colors used in Figures to make them accessible to those with...
Hi, I have checked that my taxonomy.tab exist this TaxID record. ``` grep 3240 taxonomy.tab 3240 14 3239 species Psilotum nudum ``` But when I use ktGetTaxInfo, it report an...
I'm trying to install krona from conda but the installation fails on the `Verifying transaction:` step due to missing files specified in the manifest: >CondaVerificationError: The package for krona located...
