Krona
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marbl
Interactively explore metagenomes and more from a web browser.
Hi, I trying to create a Krona plot with 4 different conditions of metagenomics results. My .txt file looks like this: Condition1 condition2 condition3 condiditon4 _taxonomy levels classification_ 12 11...
I use ktUpdateTaxonomy.sh inside my pipelines, in conda environments created by snakemake. Recently, the last couple of days it stopped working. The only message available is "is your internet connection...
Hi, Please, how do I get rid of the boxy lines in the pie chart and in the legend as well? What must I change in the output html code?...
Hi! i am trying to install KronaTools in windows OS. After downloading the KR2.8.1 and the source code, What am I supposed to do to install the KT? I tried...
Hi Developers, I installed Kronatools as root on a system so that different users can use it. I tried running ktImportTaxonomy using a regular user account and I got this...
Hello all, Until two days ago, I worked with Krona without any problems. _Kaiju > Kaiju2Krona > ktImportText_ Then I installed a new pipeline (PhytoPipe), a pipeline with many tools,...
I analyzed the report of KrakenUniq using Krona, but I found that some taxonomy IDs could not be found in the local database. I would appreciate it if you could...
Hi, I generated the Krona chart (html) and a directory of supplementary files from a .daa file generated from diamond blastx. I understand that I will not be able to...
In the Wiki for the Excel template it says that with the "Score" you can color the wedges from green to red. So i gave all rows a different score...
Hi, the taxonomy.tab used by ktImportTAXONOMY is based on NCBI taxonomic IDs. While this is great for standard NCBI-based DBs, sometimes we have to rely on alternative DBs: MGBCdb (mouse...
