LinXing Chen

> ImportError Traceback (most recent call last) Cell In[23], line 4 2 path='show' 3 test_path=("data1/densiflorus (plastid)- MT740250.1 retained.fasta") ----> 4 BCAWT_auto_test.auto_test(path,test_path) 5 BCAWT_auto_test.auto_check_file(path) > > File ~/miniconda3/lib/python3.11/site-packages/BCAWT/BCAWT_auto_test.py:24, in auto_test(path, test_file)...

> Hello sir, 'I am run Staphylococcus_aureus.fasta in your codonU tools but there is show different result. why and how to solve it's, I am new users. I am share...

> thank you...for your replying But.... I am use biopython 1.83 same problem... After that i found there GC function missing..... And i add this function solve this problem. But...

Glad to hear it! Lin-xing Chen Postdoc of the Banfield lab Earth and Planetary Science University of California, Berkeley Berkeley, CA, USA Hasanzahid10 ***@***.***> 于2024年5月18日周六 18:12写道： > Fixed! > >...

Hi Shujie, Thank you for your interest in COBRA. If your metatranscriptome was sequenced with short paired-end reads, it should totally be ok. I hope this helps. Best, Linxing

Great. I hope this helps. Cheers, Linxing

Hi, Sorry to hear that you have problem running COBRA. We noticed this issue and have been working on it. Could you please let me know (1) did you re-run...

hi @Vini2 thanks for the information. If possible please share me the "potential_join_path" file so I can have a look if these three are in the same path. We have...

Thank you. These three contigs are not in the same path, I have no idea why the file does not existed. I am wondering if you could run another sample...

Hi @Vini2, Thanks for taking a deep look at the issue. Sorry for my delayed reply. Did you still run the previous same sample? You will avoid the error if...