Rob Edwards

In case you didn't fix this, or in case someone else finds this, there is a bug in the latest version (2.2.10) of jellyfish that immediately seg faults on a...

Can you point me to a file where this issue occurs so that I can fix it?

I agree with this issue, but will not refactor the code for the current release. We will work on this for the next release.

This is fixed now. My apologies Closes #1 Rob On Wed, 16 Dec 2020 at 04:51, Stephen Nayfach wrote: > Hello - I'm not sure if you're maintaining the database,...

Can you share the original or modified GenBank file?

Hi Mike, We would love to add Cenote-Taker 2/Unlimited breadsticks, and other tools as well, and we are trying to develop this as an extensible platform for everyone. Would you...

Can you please provide an example of the genome and output, and what should happen? This sounds like an off-by-one error that we missed. Rob

`seqkit subseq` is taking the sequence from 1868451 to 1868465 including the base at position 1868465. We are (probably incorrectly) reporting the repeat to go from 1868451 to 1868465 _not_...

I haven't given up on this idea, but had few spare cycles to explore it. Now, however, I need this for another project and was prompted to come back and...

If you are reading the whole file into memory, there are [several solutions](https://edwardslab.wpengine.com/sorting-and-paring-fastq-files/) to this problem. We are explicitly handling files too large for the sequence and qualities to be...