Luke Zappia

There shouldn't be any major differences between **{zellkonverter}** v1.6.0 and v1.6.4. Could you please post the output with `verbose = TRUE` and if possible share the file you are using?

Ok, so it seems like something to do with `adata.uns` is the issue. Possibly we can add a check for this but we need know exactly what the problem is...

It might be useful to know more about what you mean by "semantic labelling" (particularly beyond this example). For the PCA example I think what happens now is in `AnnData2SCE()`...

I think we might only want to support this kind of labelling if it was an official part of **anndata** with a standard way of storing it in the file....

I don't really know anything about zarr but I would say this is probably possible if there is some core R/Bioconductor package for handling the low-level stuff. Probably also depends...

Hi @alexlenail Thanks for giving **{zellkonverter}** a go 🎉 ! I'm not sure what the timeout message is but **{zellkonverter}** v1.4.0 is only compatible with `.h5ad` files written with **anndata**...

@alexlenail Were you able to get this working after my suggestions?

Hi @PeteHaitch I will try to answer your questions but definitely happy to discuss further if needed. > 1. Why is `raw` stuck in as an _altExp_ rather than an...

@ivirshup Any input on the layers question? ☝🏻

Tried doing this quickly, writing worked ok but it broke reading.