Jake Pennington
Jake Pennington
Hi @HiroMiyawaki, Can you please try sorting again with the latest version (v4.0.19)? There was a bug in the way template positions were generated for multi-shank probes, and fixing the...
@HiroMiyawaki Would you be willing to share your data again, for the longer recording? Just to help me test some memory improvements on a dataset that I know is running...
@Lathomas42 Thanks for the information. It does look like this is the same problem that I'm working on when I have time, so a bin file would be welcome. You...
Can you please attach a screenshot of what the Kilosort4 GUI looks like after loading your data, as well as `kilosort4.log` from the results directory?
Please try updating to the latest version (v4.0.18) and re-sorting, then upload the log file again (not just a screenshot, the actual file). The new version includes more details about...
Thanks. There's definitely something off, you're detecting a *lot* more spikes than would be expected for an hour-long Neuropixels recording and using a lot of extra memory as a result....
Google drive links have worked best so far, dropbox should be fine as well. You can paste the link here, or email it to me at ***@***.*** On Thu, Oct...
Got it, thanks. I couldn't open the google drive link, I sent an access request for it from [email protected]. I'm not sure why my e-mail address wasn't showing up in...
Sorry for the late response, I'm working through a backlog of datasets to test. The good news is I was able to sort your data without any issues using the...
If you try this with the latest version and still encounter problems, let us know and we can re-open the issue.