Jake Pennington
Jake Pennington
Not exactly expected, but from the timing it looks like that's happening while saving the preprocessed data copy. That function is still using the old i/o logic to create the...
Closing this for now. The memory increase for saving preprocessed data is fixed with v4.0.38.
@Yirat-he You do not need to change `dminx` at all. If all your contacts have the same x-position, it will implicitly be treated as 0. You do not *need* to...
I see. Those adjustments make sense then. Can you please share some screenshots from the Phy results to show which part is not satisfactory?
Yes this is still suitable for sorting, there is no maximum distance in space.
We recommend using Kilosort4, there is no reason why it should not work for this type of probe. If you try Kilosort4 and encounter problems, please let us know.
Please start by upgrading Kilosort4 to the latest version. You can do that by running `pip install --upgrade kilosort` in your existing kilosort environment.
Sorry for the long delay, I must have missed this somehow. If you're still having problems with this, I would start by checking that the recording duration is correct. According...
Okay. Just for reference, we always recommend running KS4 by itself (without spikeinterface or any other third-party software) if you you run into errors and need to debug. We can't...
Thanks. I just want to reiterate that sorting a 5 second recording is well outside the expected use-case for KS4. So, I would not be surprised if you continue running...