Jake Pennington
Jake Pennington
You do not need to set it to anything. The current default, `None`, uses the existing clustering strategy. We will likely set the default to be 25,000 in the future....
Yes, that was a typo.
@rachelmcassidy `nearest_chans` uses euclidean distance, yes. `nearest_templates` also uses euclidean distance, so you may need to increase it as well, but I wouldn't recommend doing that unless you still see...
One other thing to keep in mind is that the extra channels won't necessarily be needed. There is generally enough information already in the largest channels, so you should only...
Hello, Spike times are already saved as int64 by Kilosort. Can you please try checking the spike times in a script / notebook instead of looking at Phy? It does...
Thanks, looking into it.
@seto0425 Sorry for the delay, this has been a difficult one. I fixed a related overflow in an earlier part of the pipeline, but I have still not found the...
Thank you! These would be the steps to follow, please let me know if you need any clarifications: Download repository and install in editable mode in a new kilosort environment...
Was that the correct log file? It looks like that one stopped with an error very quickly, during drift correction.
@seto0425 Sorry for the delay. I just pushed a fix for this, it will be live on pypi later today as v4.0.16.