Jake Pennington
Jake Pennington
Yes, what I meant was I fixed the new error you reported last time, the timestamp overflow problem still needs to be debugged. If sharing the data is feasible, that...
[email protected] Fyi, when people have shared with dropbox in the past I've had issues with slow downloads and dropped connections about half the time. If google drive is an option...
Got it, thanks!
@seto0425 Would you mind sharing the specs for the machine you used to sort the data (CPU, GPU, amount of memory, etc)? I'm having trouble running it on my personal...
Okay, good news and bad news: The good news is I was able to sort the data and did not encounter any problems with timestamp overflow (see Phy screenshot). The...
The machine was using an A100 graphics card and an intel processor (exact architecture unclear since it was selected from a queue on a compute cluster with multiple types). The...
Ahh I see that now. Great, thanks so much for helping figure this out!
It depends on which NP1 probe you're using, and how you configured it. Both `neuropixPhase3B1_kilosortChanMap.mat` and `neuropixPhase3B2_kilosortChanMap.mat` are Neuropixels 1 probes, and you can see the channel layout in the...
I'm not familiar with the Open Ephys presets, so I don't know if that matches up with either of our default NP1 layouts. You would have to figure out that...
Waveform duration is determined by `nt`. The default value of `61` (number of bins) corresponds to around 2ms for a 30 kHz sampling rate. High pass filter cutoff is currently...