bids-validator

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The schema says some sidecar files require entities, but the inheritance principle has historically allowed for dropping entities as necessary to allow matching more data files.: This PR breaks convention...

rwblair

Add warning for overridden sidecar fields

1

https://github.com/bids-standard/bids-specification/pull/1834 proposes RECOMMENDING against overriding JSON values as a source of confusion ("I can see this value in my JSON, why is the tool using a different one?") This should...

effigies

feat: Extract image orientation from NIfTI header

2

For #76 and #79, it would be helpful to have access to the image orientation. This PR starts with a function to determine axis codes from the the image affine....

effigies

Not pretty but it does the job: 

effigies

Render markdown embedded in schema

1

When we take field descriptions or issue messages from the schema, there may be markdown, or at the very least line breaks and tabs that cause the rendering to be...

effigies

Adding an error filter for the HED validator for BIDS

1

**Problem** For large event files the HED validator can be produce a lot of very similar errors. When they are given back to the BIDS validator, I believe the number...

VisLab

_electrodes.tsv required for iEEG

29

It seems from the ieeg-BIDS [documentation](https://bids-specification.readthedocs.io/en/stable/04-modality-specific-files/04-intracranial-electroencephalography.html#electrode-description-_electrodestsv) that the _electrodes.tsv file is _required_ for ieeg data. However, there are now several pretty impressive iEEG datasets on OpenNeuro [dataset without electrode positions](https://openneuro.org/datasets/ds003876/versions/1.0.2)...

dorahermes

deno: Report/record bids validator + hed validator in the bids-validator output

2

ATM none seems reported in deno report output. unclear if using most recent hed validator

yarikoptic

Enh/read parquet files

1

Use hyparquet library to read read parquet files.Transforms them into a columns map, which may not be desirable. Parquet files have good typing metadata that is thrown away and this...

rwblair

How to get schema version?

4

I want to save both the validator version and schema version to dataset_description.json, but I can only get the schema version (the default version, when `--schema` wasn't specified) when actually...

tientong98