bids-validator

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ATM it would look like  with me having ``` ❯ stty size 56 86 ``` on my terminal. And require a very wide terminal to actually show it unwrapped/without...

yarikoptic

feat: Add electrodes association

1

Pairs with https://github.com/bids-standard/bids-specification/pull/1896

effigies

SIDECAR_WITHOUT_DATAFILE: should adjust check so it works on annexed files (broken symlinks)

2

ATM we get a number of ``` 2: [ERR] A json sidecar file was found without a corresponding data file (code: 90 - SIDECAR_WITHOUT_DATAFILE) ./sub-0001/ses-01/fmap/sub-0001_ses-01_acq-96dirX6b0Xmb_dir-ap_epi.json ./sub-0001/ses-01/func/sub-0001_ses-01_task-alignvideo_acq-mb8_run-01_bold.json ./sub-0001/ses-02/fmap/sub-0001_ses-02_acq-mb8_dir-ap_run-01_epi.json ./sub-0001/ses-02/func/sub-0001_ses-02_task-alignvideo_acq-mb8_run-01_bold.json ./sub-0001/ses-03/fmap/sub-0001_ses-03_acq-mb8_dir-ap_run-01_epi.json ./sub-0001/ses-03/func/sub-0001_ses-03_task-alignvideo_acq-mb8_run-01_bold.json...

yarikoptic

Unclear which file in "You should define 'HEDVersion' for this file."

2

``` > datalad containers-run -n bids-validator $PWD 8: [WARN] You should define 'HEDVersion' for this file. If you don't provide this information, the HED validation will use the latest version...

yarikoptic

Errors reported incorrectly when handling too many files

16

I'm executing BIDS Validator v1.14.8 on a large dataset (~800GB, ~4500 files). The validator reports incorrectly the following errors: - [ERR] You have to define 'RepetitionTime' for this file. (code:...

mateuszpawlik

Enforce uniqueness of data files in a directory.

1

https://bids-specification.readthedocs.io/en/stable/common-principles.html#uniqueness-of-data-files fixes #1107 Added in src/valdiators/filenameValidate.ts. This check sees if another file exists in the parent directory of the context that has the contexts exact entities and sufiix but a...

rwblair

example: `schema.metadata.StimulusPresentation` Do we add recommended_fields to the json schema language? Or call validation multiple times swapping out `required` entry in json schema between required_fields and recomended_fields and adjust severity...

rwblair

Allow to validate a subset of files (folder(s))

1

I thought that we already had some issue filed or discussed but may be it was only verbal. But if you find it, please feel welcome to close this as...

yarikoptic

Add notes about things some folks have found surprising that the validator doesn't ensure.

effigies

I am updating some datasets that are on openNeuro but were validated with much earlier versions of the validator. I am getting the following unexpected (and I think incorrectly given)...

VisLab