Ilia Minkin
Ilia Minkin
Thanks, banded alignment would be very cool to have.
Hi @thekswenson , Can you use bioconda on your machine? That is probably the easiest way to install.
Hi Christian, Did you download the source archive from the ["releases" web page](https://github.com/medvedevgroup/SibeliaZ/releases)? If so, I would suggest compiling/install SibeliaZ using git cloning (see the instructions [here](https://github.com/medvedevgroup/SibeliaZ#compilation-and-installation)). Unfortunately, I don't...
Hi, Thank you for the notice. This script has been under experimental development and hence excluded from the "official" bioconda package. I will probably fix it in the next release...
Interesting. Which version of CMake do you use?
Sorry, I could not reproduce your issue. Could you please update your cmake installation? Please let me know if it does not help, I will add a binary distribution in...
I added the binaries: https://github.com/medvedevgroup/SibeliaZ/releases/download/v1.2.0/SibeliaZ-1.2.0-Linux.tar.gz
@eylenth, I am glad that the binaries are working. I'd try the latest CMake which is 3.15.3: https://cmake.org/download/.
Hi! The coverage is calculated as # the total number of positions in all genomes covered by the alignment / total length of the genomes. The alignments blocks output by...
Hi @ohdongha , Sorry for the late reply. 1. Yes, each position in the genome is only supposed to be a part of a single alignment block. 2. Yes, lower...