Ilia Minkin
Ilia Minkin
@ShoumikSaha , not right now. If you don't have an access to a machine with larger memory right away, an option worth considering is renting one on Amazon/Azure.
Hi, sorry for the late reply. Could you please provide extra details about the system you used? Particularly, the version of the operation system.
A possible solution can be found here: https://github.com/medvedevgroup/SibeliaZ/issues/28
Hi @liaoherui , Thanks for reporting the issue. I will take a look soon.
@liaoherui , 1) The crash you reported was caused by a software bug in SibeliaZ. I pushed the fix to the master branch. Please update your installation and check if...
Hi @liaoherui , Sorry for the confusion. You have to make an assumption about the highest number of instances a block has based on prior knowledge about the input genomes....
I will also update the documentation to clarify the logic behind setting the parameters.
@liaoherui I am glad that you find SibeliaZ helpful in your work. We do have plans to improve the usability of our tools.
@liaoherui , Sorry for the late reply. I will take a look and fix it soon.
@liaoherui , could you please elaborate? Do you mean that the bug occurs when FASTA files contain the characters '-'?