Young

This is what I understand about this image: You aren't actually trying to put polkapox into a container. Polkapox is a nextflow workflow, which can get very big. Instead, you...

> For 1) - what does it mean that deployed images are build to the app stage? Does this dockerfile not get pulled and then built by nextflow when it's...

There aren't really any issues. Did you want to include a test for your workflow? I recommend it. Is it alright if I remove the Docker.io file?

@jessicarowell , did you want to meet some time this week? I'd like to get this deployed for you.

@jessicarowell , do you have any questions? I'd hate to hold up you and your team's workflow development.

Your tests look great! In later Dockerfiles, you should be able to call these with `wget` (similar to [freyja](https://github.com/StaPH-B/docker-builds/blob/master/freyja/1.5.0/Dockerfile#L58-61)). As for the tostadas Dockerfile, I'm going to admit that I...

Closes https://github.com/StaPH-B/docker-builds/issues/734

Medaka 1.11.2 came out, so I've updated the version number. I did attempt to use the nvidia/cuda:11.2.2-cudnn8-runtime-ubuntu20.04 base (focal) like nanopore does for their version of medaka, but I kept...

There's also a related python package : https://github.com/althonos/pyhmmer Does anyone use that?

Notes about what needs to happen to adjust the Dockerfile : https://github.com/StaPH-B/docker-builds/issues/538