Eric Deutsch
Eric Deutsch
@chunyuma need help with this. Or maybe someone else? I thought perhaps the above errors might be fixed if I merged `master` into `NewFmt`, but I seem to have made...
I think we should test and deploy rapidly something that works for a single analyses, and ideally that is hoped will work for multiple, and let's get it out there....
sure, the latest `master` has been rolled out to the usual locations following the `master` branch. ``` code/ARAX/ARAXQuery/ARAX_infer.py | 61 +++++++++-------- code/ARAX/Documentation/DSL_Documentation.md | 328 +++++++++++++++++++++++++++++++++++++++++++++--------------------------------------------- code/ARAX/test/test_ARAX_infer.py | 51 ++++++++++++-- ```
@chunyuma will test on /beta to verify that works. Requests to roll out to production will be made this Friday.
For KG2 this is no longer relevant. And for ARAX, I just tested it, and it is working correctly now. closing.
try to fix for end of Sprint 6? @amykglen
perhaps in concert with a limiting mechanism: https://github.com/NCATSTranslator/OperationsAndWorkflows/issues/73
The max_results thing is only our own ARAX/RTX-KG2 thing, and I don't think we ever properly implemented it. I vote we just let CURIE-less query_graphs proceed if RTX-KG2, and you...
another idea: instead of performing 50 from-scratch queries and asserting one or two things in each, might it be possible to perform only a handful of from-scratch queries and then...
Here's a play-by-play of our acetaminophen query, which takes 57 seconds: ``` 2023-01-18T19:49:23.180082 DEBUG: in asynchronous_query 2023-01-18T19:49:23.180170 DEBUG: In query_return_stream 2023-01-18T19:49:23.180458 INFO: ARAX Query launching on incoming Query 2023-01-18T19:49:23.180507 DEBUG: ...