Ryan Dale

Results 126 comments of Ryan Dale

No worries at all, take your time. I'll keep this open for now but label as feature request.

Thank you for this! (I can't quite work out how to permanently enable running tests for this PR so I have to keep manually enabling...)

Fantastic! Thanks for working out all the details. I don't have the bandwidth that I used to, so this is super helpful. At some point I'll need to do a...

Uh oh...upon uploading to TestPyPI, I'm unable to install locally on macOS or Linux with the following: ```bash conda create -y -p ./env "python>=3.13" conda activate ./env python3 -m pip...

Ugh, looks like I hadn't run the `clean` part of `setup.py`. All fixed; v0.12 is now in PyPI and bioconda. Thanks again for this.

Thanks @dlaehnemann! Can you add a test case for this? [`test_lint.py`](https://github.com/bioconda/bioconda-utils/blob/master/test/test_lint.py) is the runner; [`lint_cases.yaml`](https://github.com/bioconda/bioconda-utils/blob/master/test/lint_cases.yaml) has the test cases. You'll probably need to add a new recipe (say, `three`) to...

@dlaehnemann thanks for this investigation! Regarding plans to switch to `rattler-build` & `recipe.yaml` I don't think we have a formal plan or timeline , but I do think it's safe...

v0.12 now supports Python 3.13 via #424 (thanks @theAeon), and is available on PyPI and bioconda.

@Accompany0313 sorry for such a late reply, but if this is still an issue can you provide the file that you're working with? For example, the chromsizes file might not...

I haven't dug any deeper, but did find empirically that replacing ``` --max-jobs-per-second=1 ``` with ``` --max-jobs-per-timespan="60/1m" ``` solved this issue in v8.27.0. Notably, `"1/1s"` did _not_ work, but `"60/1m"`...