Charles Tapley Hoyt
Charles Tapley Hoyt
This is a proof of concept showing that we can propagate information about _where_ a field displayed on the Bioregistry came from. This is important because the Bioregistry imports data...
It would be really useful for potential users if the code were organized as a python package and so it could be pip installed. Would you be willing to accept...
I've written package `pystow` that's quite good at this sort of thing. If we're able to merge #2, then I could also submit a PR for that
Closes #1 This PR does the following: 1. Switches code to the `src/` layout and switches imports to work in a package setting 2. Adds setup configuration (setup.py is always...
https://github.com/jgm/pandoc-citeproc is now archived and says that its functionality is now built into pandoc, and that no filter is necessary. A lot of the tooling I've found for JOSS has...
It doesn't appear this project has documentation (jupyter notebooks don't count :p). Would highly suggest using sphinx to auto-generate some
Before this data set goes in hetionet, do the UMLS terms get mapped to either MeSH or DOID?
Nico asked me to double check the content in https://github.com/obophenotype/ncbitaxon/pull/88#discussion_r1361906045 and I realized that the turtle was very difficult to read. This PR updates the way the turtle is output...
Most terms have an xref to a namespace with a prefix `GC_ID`. Is anyone familiar with what that is or what it abbreviates?
This PR does the following: 1. Encompasses the contents of `if __name__ == '__main__': ...` in both `molbert.apps.smiles` and `molbert.apps.finetune` in respective `main()` functions 2. Introduces python entrypoints in the...