Charles Tapley Hoyt
Charles Tapley Hoyt
This script will canonicalize the order of entries in the famplex files. This will make it easier to curate since you can put new entries anywhere, as well as hopefully...
From @bgyori > Classification of entities: I think this classification can be automatically inferred from membership so I'm not sure if it should be something that is curated/modifiable or something...
Closes #86 This PR adds a script, `famplex/reorganize_old_resources.py` that migrates the old resource TSVs into the `famplex/resources/` folder. It moves the code in the `exports/` folder to `famplex/export/` and refactors...
Add an entry for the ATP-sensitive potassium channel (ref [wikipedia](https://en.wikipedia.org/wiki/ATP-sensitive_potassium_channel)). It already has an entry in the Gene Ontology at [GO:0008282](http://amigo.geneontology.org/amigo/term/GO:0008282) under "*inward rectifying potassium channel*."
- [x] Add identifiers column to entities.csv - [x] Add descriptions.tsv - [x] Refactor BELNS exporter to handle new format - [x] Refactor OBO exporter to handle new format and...
GSK180736A is a GRK2 inhibitor. References: - http://www.selleckchem.com/products/gsk180736a.html - https://pubchem.ncbi.nlm.nih.gov/compound/11233873 - After pasting the structure into ChEBI's search, it looks like there is no entry
All entries in HGNC Gene Groups should be subclasses of Gene Group. This is a superclass of gene family, since it can include all sorts of classifications (based on parology,...
Similar to #176, now I'm running the whole make suite and getting a different error (also looks like it's due to a path missing): ``` ... robot --catalog catalog-v001.xml query...
Related to https://github.com/OBOFoundry/OBOFoundry.github.io/pull/2392/files, I would like there to be some documentation on how I can add new checks to the dashboard. Right now, the layout of this repository is really...
Take AEO as an example. The dashboard page (https://dashboard.obofoundry.org/dashboard/aeo/fp7.html) says AEO is using 7 non-RO relations. If you look though, it’s pretty obvious that some of them probably are in...