cellxgene

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Make gene functions discoverable

22

I think it's important to contextualize diffexp results by what these genes _do_, biologically. There are multiple "levels" at which we could support this: 1) Just link out to wikigene...

sidneymbell

Design a new dataset for testing automation

4

We would benefit from adding/replacing our current testing dataset(pbmc3k) with a deeper and more diverse dataset. This could be enhanced with a joining of multiple existing datasets that would stress...

seve

`client/src/components/geneExpression/menus/addGenes.js` and `client/src/components/geneExpression/geneSet.js` both have the function _genesToUpper, this should be broken out into a util.

colinmegill

Throughout the codebase we use `bool ?

colinmegill

Users want ability to maintain the order of their labels rather than default to alphabetical

3

Thanks for the feedback, [email protected]! In his words, they want to order "the contents of categorical metadata non-alphabetically. One use case is listing the cell types (our ‘free_annotation’ at https://hlca.ds.czbiohub.org/)...

liaprins-czi

Blueprint `Popover2` should be used throughout the codebase over `Popover`

colinmegill

Tech debt issue `icon={IconNames.TRASH}` rather than `icon={}`

colinmegill

Genes as primary view (heatmap)

23

The overall idea is to allow toggling between the 'cells' view (umap/tsne) with a 'genes' view (heatmap probably) so that cellxgene users can get a sense of the overall shape...

colinmegill

Replace no-ops with application keyboard navigation. Presently, we satisfy the linter with a no-op. `onKeyPress={() => {}}` without this no-op: ``` 104:11 error Visible, non-interactive elements with click handlers must...

colinmegill

Hi, I'm working on a very large integration of many datasets, and me and my collaborators use cellxgene to explore the data. One thing we would really like, is the...

LisaSikkema