cellxgene
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chanzuckerberg
An interactive explorer for single-cell transcriptomics data
The hosted-cellxgene-service-role-policy-* has list and get permissions for all s3 buckets. This is a potential security concern and it might be safer to limit it to `arn:…:host-cellxgene*` -- however this...
Hello! CellxGene is by far my favourite viewer and kudos for doing a great job developing it and maintaining it! What are the odds of extending cellxgene to handle other...
if you do diffexp, it adds genes to the rsb. If you also manually add a gene that is in the diffexp result, it will now display twice in the...
I suggested this to @colinmegill in a demo. And it's related to [this](https://github.com/chanzuckerberg/cellxgene/issues/1732) The feature: Once a gene set has been created, the user can add _all_ genes that are...
Scientists are sharing cellxgene on the interwebs. We can make this easier by pre-formatting tweets using meta tags.  Scientists frequently seem to tweet out a specific view — we...
from @ademorree: > What would be really cool is if the software could replicate the cell gating strategies from FACS software. In FACS software software you can plot all cells...
**Is your feature request related to a problem? Please describe.** We would like to use cell×gene as a component instead of as a full page application People would upload/choose a...
Dear Authors, I have computed differential expression results for clusters using external methods and would like to share these with my colleagues through cellxgene. Is there a way to load...
Currently, each gene in cellxgene has only one name associated with it (the Index of `adata.var`). However, the other fields in `adata.var` can be used to hold alternative gene IDs....
From @aopisco: If a user creates a cell type annotation as in #996, allow them to link each label to a specified `gene set` as evidence (with congruent, ontology-based names...
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An interactive explorer for single-cell transcriptomics data