qurro
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biocore
Visualize differentially ranked features (taxa, metabolites, ...) and their log-ratios across samples
- Autoselection inputs are hard to read - Search boxes in the DataTables extend past the bottom left div's right border - The bar width controls look kind of gross...
e.g. "Filter to samples where `body_site` contains the text `gill`." This would be a cool feature, but it'd require a pretty sizable amount of work to make it fit in...
Something like "Set log-ratio from clicking twice on the rank plot." could be useful, I think, esp. for new users. We could also do this for intermediate clicks on the...
This would make it stand out to the eye more than it currently does, and would help users avoid confusing it with the `Apply Filtering` button. This would also have...
Based on discussion with @antgonza.
A continuation of the ideas laid out in #132. This would basically let the user do multiple queries of arbitrary types on the same half of a log ratio. Think...
This would make it possible to replicate "A / (everything that isn't A)"-style log-ratios, where A isn't just a single feature/taxon/etc. I think this shouldn't be *too* difficult to finagle...
Code for this used to be available in Qurro months ago, but I took it out because it was buggy and no one was using it. ...But now that more...
This would enable the replication of stuff like figs. 5c and 5d in the [DEICODE paper](https://msystems.asm.org/content/4/1/e00016-19.abstract). Should be fairly trivial to implement, knock on wood.