Jim Balhoff
Jim Balhoff
@kltm do we need this merged first for never_in_taxon to show up? https://github.com/geneontology/amigo/pull/720
I don't think you will get the never_in_taxon without Chris's PR. The precomputed taxon constraints just adds more, in different places, of the same things we had before.
@kltm does the pipeline not start with a fresh ontology checkout each time? Would that be possible? I see another problem here that I didn't know about, which is that...
@hoganwr one way you could do this is with three applications of [unmerge](http://robot.obolibrary.org/unmerge): ``` robot unmerge -i left.owl -i right.owl -o only-left.owl robot unmerge -i right.owl -i left.owl -o only-right.owl...
> There is a blob of RDF/XML in the intersection with the class IRI annotated with its label, but it doesn't show up in Protege for some reason (and even...
@allenbaron I've also been tripped up sometimes by `--query` taking two arguments, but finally realized it's because you can specify any number of queries on the same command line, each...
Thanks, I will follow that issue.
@matentzn I think your idea of another field for lang is appealing! Else we might need to include quotes within the actual parsed string values (but we could probably make...
@tmushayahama can you provide a sequence of `curl` commands against the minerva API that demonstrate the problem?
@tmushayahama you were right; here is a fix: https://github.com/geneontology/minerva/pull/564