Albert Vilella

Results 70 issues of Albert Vilella

Hi, I am using the BLAST hits colouring to help identify the relative orientation of known sequences over the gfa of an assembly. Some of the resulting contigs are linear...

Most look ups associated to suspend/hibernate or reboot into Windows _can_ be avoided by using the _PS0 and _PS3 calls that many ACPI tables already have, instead of calling directly...

Feature request. E.g. csvtk mutate2 normal behaviour: ``` seq 1 10 | csvtk add-header -n foo | csvtk mutate2 -n bar -e '$foo + "yolo"' foo,bar 1,1yolo 2,2yolo 3,3yolo 4,4yolo...

This is a feature request for the `csvtk split` command to have and additional `--nlines` option so that it behaves similarly to the GNU utils split `--lines` (https://www.gnu.org/software/coreutils/manual/html_node/split-invocation.html) but deals...

new feature

Similar to bug #465 , I also get issues like the one below: ``` I0516 08:33:11.303210 140061298210624 jackhmmer.py:133] Launching subprocess "/home/user/miniconda3/envs/alphafold/bin/jackhmmer -o /dev/null -A /tmp/tmpx9qnk8ys/output.sto --noali --F1 0.0005 --F2 5e-05...

third-party tool

This could be unrelated to this repo and instead be just some sort of drivers issue, but I'll post the error just in case someone can help. We've installed this...

error report

Any ideas? This is on an Ubuntu 22.04 machine with 4 different GPUs, one of them a 16GB RTX A4000. ``` 2022-07-06 15:20:28.789653: I tensorflow/stream_executor/platform/default/dso_loader.cc:53] Successfully opened dynamic library libcudnn.so.8...

Hi again @dariober , I have a bash loop that will create pdf screenshots of a list of regions for one bam file. This is the command-line I came up...

Hi @dariober , Silly question but, how do I input multiple `-x` commands for a non-interactive bash statement? E.g. ``` ASCIIGenome -fa $fa -ni -x "command1 opt1 command2 opt2 ......

### Is there an existing issue for this? - [X] I have searched the existing issues. ### Is this issue related to iced? - [X] My hardware is compatible and...

bug
wgpu
compatibility