Albert Vilella

Has this been implemented into csvtk? Or is it a matter of piping into shuf? If so, how can we skip the header line from the shuffling? Thanks in advance.

I tried the v2.2.0 version today, and my code won't work with run_relax true, giving the same error as the one reported by @galshuler , but it does seem to...

Hi Samuel and others, Most of my attempts were on a 16Gb NVIDIA card, but we are considering a 24Gb to see if we can run the multimer predictions with...

I get a similar issue to this every once in a while, when jackhmmer returns hits from querying uniprot.fasta and some of the hits contain the wrong type of characters...

I think it's down to lack of enough RAM memory in the NVIDIA GPU we are using, so it correlates with the length of the input sequences. Using 'run_relax' false...

... not impressed myself ;-) On Sun, Jul 10, 2016 at 4:23 PM, Javi Merino [email protected] wrote: > Let memprof annotate classes > > ## Fix #14 https://github.com/jmdana/memprof/issues/14 > >...

Ok, thanks. I've got a Linux machine with half a dozen Nvidia 4Gb RAM GPUs connected via Thunderbolt 3, so I wonder if tweaking the parameters, those would be able...

That's perfect, thank you. I think I can use the batch size to adjust the basecalling of runs to our cluster of Nvidia cards with 4GB. Does the software know...

Thanks for looking into it. On Thu, Jan 31, 2019 at 7:09 AM Antonio V wrote: > Hi! > > I'm not very familiarized with resource management in GCal and...

I think adding two extra options would cover most of the possibilities: `--5primemost` and/or `--3primemost` - Clip from the bed region that is 5'prime most (left-most) side of the read...